CARRIE

Computational Ascertainment of Regulatory Relationships (Inferred from Expression)

CARRIE takes two condition microarray data and applies promoter analysis to infer the stimulated/repressed transcriptional regulatory network.

1. Upload Array Data

Pre-Processed
Un-Processed

2. Choose Criteria for Significant Expression Change

Fold Change
P-value

3. Choose Matrix List

Details

4. Specify Promoters

Use ours

or upload your own

5. Choose Criteria for Significant Transcription Factor Detection

Frequency of Significant Sites in Random Promoters
P-value for Binding Site Overabundance in one promoter

6.


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