Comet Input Form

Click on the links to view instructions.
Comet home

Paste a DNA sequence into the box or enter a GenBank identifier:

OR upload a DNA sequence from a file:
(Optional) Set subsequence From: To:

Choose a bunch of cis-elements:

TATA	Sp1	CRE	ERE	NF-1	E2F	Mef-2	Myf
CCAAT	AP-1	Ets	Myc	GATA	LSF	SRF	Tef

AND / OR enter your own cis-elements:
(Get cis-element matrices from TRANSFAC - free registration required)

AND / OR upload cis-elements from a file:

Gap parameter (average distance between motifs within a cluster):
Window size:
E-value threshold:
Pseudocount: